WIP program to delete Scope data

This commit is contained in:
Bryan Boreham
2018-11-15 14:22:23 +00:00
parent e49c2dcb84
commit 1bc5a23922

View File

@@ -0,0 +1,374 @@
package main
import (
"context"
"flag"
"fmt"
"io/ioutil"
"net/http"
_ "net/http/pprof"
"net/url"
"os"
"strconv"
"strings"
"sync"
"time"
"github.com/aws/aws-sdk-go/aws"
"github.com/aws/aws-sdk-go/aws/awserr"
"github.com/aws/aws-sdk-go/aws/session"
"github.com/aws/aws-sdk-go/service/dynamodb"
"github.com/aws/aws-sdk-go/service/s3"
"github.com/prometheus/client_golang/prometheus"
"github.com/prometheus/client_golang/prometheus/promauto"
"github.com/prometheus/client_golang/prometheus/promhttp"
log "github.com/sirupsen/logrus"
awscommon "github.com/weaveworks/common/aws"
"github.com/weaveworks/common/instrument"
)
type scanner struct {
startHour int
stopHour int
segments int
deleters int
deleteBatchSize int
tableName string
address string
dynamoDB *dynamodb.DynamoDB
s3 *s3.S3
// Readers send items on this chan to be deleted
delete chan map[string]*dynamodb.AttributeValue
retry chan map[string]*dynamodb.AttributeValue
// Deleters read batches of items from this chan
batched chan []*dynamodb.WriteRequest
// Keys to delete in s3
s3chan chan *s3.DeleteObjectInput
}
var (
pagesPerDot int
)
var (
dynamoRequestDuration = promauto.NewHistogramVec(prometheus.HistogramOpts{
Namespace: "scope",
Name: "dynamo_request_duration_seconds",
Help: "Time in seconds spent doing DynamoDB requests.",
Buckets: prometheus.DefBuckets,
}, []string{"method", "status_code"})
dynamoConsumedCapacity = promauto.NewCounterVec(prometheus.CounterOpts{
Namespace: "scope",
Name: "dynamo_consumed_capacity_total",
Help: "Total count of capacity units consumed per operation.",
}, []string{"method"})
dynamoValueSize = promauto.NewCounterVec(prometheus.CounterOpts{
Namespace: "scope",
Name: "dynamo_value_size_bytes_total",
Help: "Total size of data read / written from DynamoDB in bytes.",
}, []string{"method"})
s3RequestDuration = promauto.NewHistogramVec(prometheus.HistogramOpts{
Namespace: "scope",
Name: "s3_request_duration_seconds",
Help: "Time in seconds spent doing S3 requests.",
Buckets: prometheus.DefBuckets,
}, []string{"method", "status_code"})
)
func main() {
var (
collectorURL string
s3URL string
orgsFile string
scanner scanner
loglevel string
)
flag.StringVar(&collectorURL, "app.collector", "local", "Collector to use (local, dynamodb, or file/directory)")
flag.StringVar(&s3URL, "app.collector.s3", "local", "S3 URL to use (when collector is dynamodb)")
flag.IntVar(&scanner.startHour, "start-hour", 406848, "Hour number to start")
flag.IntVar(&scanner.stopHour, "stop-hour", 406848, "Hour number to stop (0 for current hour)")
flag.IntVar(&scanner.segments, "segments", 1, "Number of segments to read in parallel")
flag.IntVar(&scanner.deleters, "deleters", 1, "Number of deleters to run in parallel")
flag.IntVar(&scanner.deleteBatchSize, "delete-batch-size", 25, "Number of delete requests to batch up")
flag.StringVar(&scanner.address, "address", "localhost:6060", "Address to listen on, for profiling, etc.")
flag.StringVar(&orgsFile, "delete-orgs-file", "", "File containing IDs of orgs to delete")
flag.StringVar(&loglevel, "log-level", "info", "Debug level: debug, info, warning, error")
flag.IntVar(&pagesPerDot, "pages-per-dot", 10, "Print a dot per N pages in DynamoDB (0 to disable)")
flag.Parse()
parsed, err := url.Parse(collectorURL)
checkFatal(err)
s3Address, err := url.Parse(s3URL)
checkFatal(err)
dynamoDBConfig, err := awscommon.ConfigFromURL(parsed)
checkFatal(err)
s3Config, err := awscommon.ConfigFromURL(s3Address)
checkFatal(err)
bucketName := strings.TrimPrefix(s3Address.Path, "/")
tableName := strings.TrimPrefix(parsed.Path, "/")
scanner.s3 = s3.New(session.New(s3Config))
// HTTP listener for profiling
go func() {
http.Handle("/metrics", promhttp.Handler())
checkFatal(http.ListenAndServe(scanner.address, nil))
}()
orgs := []string{}
if orgsFile != "" {
content, err := ioutil.ReadFile(orgsFile)
checkFatal(err)
orgs = strings.Fields(string(content))
}
if scanner.stopHour == 0 {
scanner.stopHour = int(time.Now().Unix() / int64(time.Hour/time.Second))
}
session := session.New(dynamoDBConfig)
scanner.dynamoDB = dynamodb.New(session)
// Unbuffered chan so we can tell when batcher has received all items
scanner.delete = make(chan map[string]*dynamodb.AttributeValue)
scanner.retry = make(chan map[string]*dynamodb.AttributeValue, 100)
scanner.batched = make(chan []*dynamodb.WriteRequest)
scanner.s3chan = make(chan *s3.DeleteObjectInput)
var deleteGroup sync.WaitGroup
deleteGroup.Add(1 + scanner.deleters*2)
var pending sync.WaitGroup
go func() {
scanner.batcher(&pending)
deleteGroup.Done()
}()
for i := 0; i < scanner.deleters; i++ {
go func() {
scanner.deleteLoop(&pending)
deleteGroup.Done()
}()
go func() {
scanner.deleteLoopS3(&pending)
deleteGroup.Done()
}()
}
totals := newSummary()
ctx := context.Background()
for _, org := range orgs {
for hour := scanner.startHour; hour <= scanner.stopHour; hour++ {
keys, err := reportKeysInRow(ctx, scanner.dynamoDB, tableName, org, int64(hour))
checkFatal(err)
fmt.Printf("%s: %d Keys: %d\n", org, hour, len(keys))
for _, key := range keys {
input := &s3.DeleteObjectInput{
Bucket: aws.String(bucketName),
Key: aws.String(key),
}
scanner.s3chan <- input
}
}
}
// Ensure that batcher has received all items so it won't call Add() any more
scanner.delete <- nil
// Wait for pending items to be sent to DynamoDB
pending.Wait()
// Close chans to signal deleter(s) and batcher to terminate
close(scanner.batched)
close(scanner.retry)
close(scanner.s3chan)
deleteGroup.Wait()
fmt.Printf("\n")
totals.print()
}
func reportKeysInRow(ctx context.Context, db *dynamodb.DynamoDB, tableName, userid string, row int64) ([]string, error) {
rowKey := fmt.Sprintf("%s-%s", userid, strconv.FormatInt(row, 10))
var resp *dynamodb.QueryOutput
err := instrument.TimeRequestHistogram(ctx, "DynamoDB.Query", dynamoRequestDuration, func(_ context.Context) error {
var err error
resp, err = db.Query(&dynamodb.QueryInput{
TableName: aws.String(tableName),
KeyConditions: map[string]*dynamodb.Condition{
hourField: {
AttributeValueList: []*dynamodb.AttributeValue{
{S: aws.String(rowKey)},
},
ComparisonOperator: aws.String("EQ"),
},
},
ReturnConsumedCapacity: aws.String(dynamodb.ReturnConsumedCapacityTotal),
})
return err
})
if resp.ConsumedCapacity != nil {
dynamoConsumedCapacity.WithLabelValues("Query").
Add(float64(*resp.ConsumedCapacity.CapacityUnits))
}
if err != nil {
return nil, err
}
result := []string{}
for _, item := range resp.Items {
reportKey := item[reportField].S
if reportKey == nil {
log.Errorf("Empty row!")
continue
}
dynamoValueSize.WithLabelValues("BatchGetItem").
Add(float64(len(*reportKey)))
result = append(result, *reportKey)
}
return result, nil
}
const (
hourField = "hour"
tsField = "ts"
reportField = "report"
hashKey = "h"
rangeKey = "r"
valueKey = "c"
)
type summary struct {
counts map[int]int
}
func newSummary() summary {
return summary{
counts: map[int]int{},
}
}
func (s *summary) accumulate(b summary) {
for k, v := range b.counts {
s.counts[k] += v
}
}
func (s summary) print() {
for user, count := range s.counts {
fmt.Printf("%d, %d\n", user, count)
}
}
func checkFatal(err error) {
if err != nil {
log.Error("msg", "fatal error", "err", err)
os.Exit(1)
}
}
func throttled(err error) bool {
awsErr, ok := err.(awserr.Error)
return ok && (awsErr.Code() == dynamodb.ErrCodeProvisionedThroughputExceededException)
}
func (sc *scanner) deleteLoopS3(pending *sync.WaitGroup) {
ctx := context.Background()
for {
item, ok := <-sc.s3chan
if !ok {
return
}
log.Debug("msg", "S3 delete", "key", aws.StringValue(item.Key))
err := instrument.TimeRequestHistogram(ctx, "S3.Delete", s3RequestDuration, func(_ context.Context) error {
_, err := sc.s3.DeleteObjectWithContext(ctx, item)
return err
})
checkFatal(err)
}
}
func (sc *scanner) deleteLoop(pending *sync.WaitGroup) {
for {
batch, ok := <-sc.batched
if !ok {
return
}
log.Debug("msg", "about to delete", "num_requests", len(batch))
ret, err := sc.dynamoDB.BatchWriteItem(&dynamodb.BatchWriteItemInput{
RequestItems: map[string][]*dynamodb.WriteRequest{
sc.tableName: batch,
},
})
if err != nil {
if throttled(err) {
// Send the whole request back into the batcher
for _, item := range batch {
sc.retry <- item.DeleteRequest.Key
}
} else {
log.Error("msg", "unable to delete", "err", err)
pending.Add(-len(batch))
}
continue
}
count := 0
// Send unprocessed items back into the batcher
for _, items := range ret.UnprocessedItems {
count += len(items)
for _, item := range items {
sc.retry <- item.DeleteRequest.Key
}
}
pending.Add(-(len(batch) - count))
}
}
// Receive individual requests, and batch them up into groups to send to DynamoDB
func (sc *scanner) batcher(pending *sync.WaitGroup) {
finished := false
var requests []*dynamodb.WriteRequest
for {
// We will allow in new data if the queue isn't too long
var in chan map[string]*dynamodb.AttributeValue
if len(requests) < 1000 {
in = sc.delete
}
// We will send out a batch if the queue is big enough, or if we're finishing
var out chan []*dynamodb.WriteRequest
outlen := len(requests)
if len(requests) >= sc.deleteBatchSize {
out = sc.batched
outlen = sc.deleteBatchSize
} else if finished && len(requests) > 0 {
out = sc.batched
}
var keyMap map[string]*dynamodb.AttributeValue
var ok bool
select {
case keyMap = <-in:
if keyMap == nil { // Nil used as interlock to know we received all previous values
finished = true
} else {
pending.Add(1)
}
case keyMap, ok = <-sc.retry:
if !ok {
return
}
case out <- requests[:outlen]:
requests = requests[outlen:]
}
if keyMap != nil {
requests = append(requests, &dynamodb.WriteRequest{
DeleteRequest: &dynamodb.DeleteRequest{
Key: keyMap,
},
})
}
}
}