diff --git a/cmd/fix/fix.go b/cmd/fix/fix.go
new file mode 100644
index 00000000..33ee495c
--- /dev/null
+++ b/cmd/fix/fix.go
@@ -0,0 +1,45 @@
+package fix
+
+import (
+	"errors"
+
+	"github.com/kubescape/kubescape/v2/core/meta"
+	metav1 "github.com/kubescape/kubescape/v2/core/meta/datastructures/v1"
+
+	"github.com/spf13/cobra"
+)
+
+var fixCmdExamples = `
+  Fix command is for fixing kubernetes manifest files based on a scan command output.
+  Use with caution, this command will change your files in-place.
+
+  # Fix kubernetes YAML manifest files based on a scan command output (output.json)
+  1) kubescape scan --format json --format-version v2 --output output.json
+  2) kubescape fix output.json
+
+`
+
+func GetFixCmd(ks meta.IKubescape) *cobra.Command {
+	var fixInfo metav1.FixInfo
+
+	fixCmd := &cobra.Command{
+		Use:     "fix <report output file>",
+		Short:   "Fix misconfiguration in files",
+		Long:    ``,
+		Example: fixCmdExamples,
+		RunE: func(cmd *cobra.Command, args []string) error {
+			if len(args) < 1 {
+				return errors.New("report output file is required")
+			}
+			fixInfo.ReportFile = args[0]
+
+			return ks.Fix(&fixInfo)
+		},
+	}
+
+	fixCmd.PersistentFlags().BoolVar(&fixInfo.NoConfirm, "no-confirm", false, "No confirmation will be given to the user before applying the fix (default false)")
+	fixCmd.PersistentFlags().BoolVar(&fixInfo.DryRun, "dry-run", false, "No changes will be applied (default false)")
+	fixCmd.PersistentFlags().BoolVar(&fixInfo.SkipUserValues, "skip-user-values", true, "Changes which involve user-defined values will be skipped")
+
+	return fixCmd
+}
diff --git a/cmd/root.go b/cmd/root.go
index bcd3d671..7ea31546 100644
--- a/cmd/root.go
+++ b/cmd/root.go
@@ -10,6 +10,7 @@ import (
 	"github.com/kubescape/kubescape/v2/cmd/config"
 	"github.com/kubescape/kubescape/v2/cmd/delete"
 	"github.com/kubescape/kubescape/v2/cmd/download"
+	"github.com/kubescape/kubescape/v2/cmd/fix"
 	"github.com/kubescape/kubescape/v2/cmd/list"
 	"github.com/kubescape/kubescape/v2/cmd/scan"
 	"github.com/kubescape/kubescape/v2/cmd/submit"
@@ -78,6 +79,7 @@ func getRootCmd(ks meta.IKubescape) *cobra.Command {
 	rootCmd.AddCommand(version.GetVersionCmd())
 	rootCmd.AddCommand(config.GetConfigCmd(ks))
 	rootCmd.AddCommand(update.GetUpdateCmd())
+	rootCmd.AddCommand(fix.GetFixCmd(ks))
 
 	return rootCmd
 }
diff --git a/core/core/fix.go b/core/core/fix.go
new file mode 100644
index 00000000..2b2ffe98
--- /dev/null
+++ b/core/core/fix.go
@@ -0,0 +1,72 @@
+package core
+
+import (
+	"fmt"
+	"strings"
+
+	logger "github.com/kubescape/go-logger"
+	metav1 "github.com/kubescape/kubescape/v2/core/meta/datastructures/v1"
+
+	"github.com/kubescape/kubescape/v2/core/pkg/fixhandler"
+)
+
+const NoChangesApplied = "No changes were applied."
+const NoResourcesToFix = "No issues to fix."
+const ConfirmationQuestion = "Would you like to apply the changes to the files above? [y|n]: "
+
+func (ks *Kubescape) Fix(fixInfo *metav1.FixInfo) error {
+	logger.L().Info("Reading report file...")
+	handler, err := fixhandler.NewFixHandler(fixInfo)
+	if err != nil {
+		return err
+	}
+
+	resourcesToFix := handler.PrepareResourcesToFix()
+
+	if len(resourcesToFix) == 0 {
+		logger.L().Info(NoResourcesToFix)
+		return nil
+	}
+
+	handler.PrintExpectedChanges(resourcesToFix)
+
+	if fixInfo.DryRun {
+		logger.L().Info(NoChangesApplied)
+		return nil
+	}
+
+	if !fixInfo.NoConfirm && !userConfirmed() {
+		logger.L().Info(NoChangesApplied)
+		return nil
+	}
+
+	updatedFilesCount, errors := handler.ApplyChanges(resourcesToFix)
+	logger.L().Info(fmt.Sprintf("Fixed resources in %d files.", updatedFilesCount))
+
+	if len(errors) > 0 {
+		for _, err := range errors {
+			logger.L().Error(err.Error())
+		}
+		return fmt.Errorf("Failed to fix some resources, check the logs for more details")
+	}
+
+	return nil
+}
+
+func userConfirmed() bool {
+	var input string
+
+	for {
+		fmt.Printf(ConfirmationQuestion)
+		if _, err := fmt.Scanln(&input); err != nil {
+			continue
+		}
+
+		input = strings.ToLower(input)
+		if input == "y" || input == "yes" {
+			return true
+		} else if input == "n" || input == "no" {
+			return false
+		}
+	}
+}
diff --git a/core/meta/datastructures/v1/fix.go b/core/meta/datastructures/v1/fix.go
new file mode 100644
index 00000000..e4d7fe10
--- /dev/null
+++ b/core/meta/datastructures/v1/fix.go
@@ -0,0 +1,8 @@
+package v1
+
+type FixInfo struct {
+	ReportFile     string // path to report file (mandatory)
+	NoConfirm      bool   // if true, no confirmation will be given to the user before applying the fix
+	SkipUserValues bool   // if true, user values will not be changed
+	DryRun         bool   // if true, no changes will be applied
+}
diff --git a/core/meta/ksinterface.go b/core/meta/ksinterface.go
index 199b1710..4519ba62 100644
--- a/core/meta/ksinterface.go
+++ b/core/meta/ksinterface.go
@@ -25,4 +25,7 @@ type IKubescape interface {
 
 	// delete
 	DeleteExceptions(deleteexceptions *metav1.DeleteExceptions) error
+
+	// fix
+	Fix(fixInfo *metav1.FixInfo) error
 }
diff --git a/core/pkg/fixhandler/datastructures.go b/core/pkg/fixhandler/datastructures.go
new file mode 100644
index 00000000..6b2601ae
--- /dev/null
+++ b/core/pkg/fixhandler/datastructures.go
@@ -0,0 +1,22 @@
+package fixhandler
+
+import (
+	"github.com/armosec/armoapi-go/armotypes"
+	metav1 "github.com/kubescape/kubescape/v2/core/meta/datastructures/v1"
+	"github.com/kubescape/opa-utils/reporthandling"
+	reporthandlingv2 "github.com/kubescape/opa-utils/reporthandling/v2"
+)
+
+// FixHandler is a struct that holds the information of the report to be fixed
+type FixHandler struct {
+	fixInfo       *metav1.FixInfo
+	reportObj     *reporthandlingv2.PostureReport
+	localBasePath string
+}
+
+// ResourceFixInfo is a struct that holds the information about the resource that needs to be fixed
+type ResourceFixInfo struct {
+	YamlExpressions map[string]*armotypes.FixPath
+	Resource        *reporthandling.Resource
+	FilePath        string
+}
diff --git a/core/pkg/fixhandler/fixhandler.go b/core/pkg/fixhandler/fixhandler.go
new file mode 100644
index 00000000..26005b20
--- /dev/null
+++ b/core/pkg/fixhandler/fixhandler.go
@@ -0,0 +1,295 @@
+package fixhandler
+
+import (
+	"encoding/json"
+	"fmt"
+	"io/ioutil"
+	"os"
+	"path"
+	"strconv"
+	"strings"
+
+	"github.com/armosec/armoapi-go/armotypes"
+	metav1 "github.com/kubescape/kubescape/v2/core/meta/datastructures/v1"
+
+	logger "github.com/kubescape/go-logger"
+	"github.com/kubescape/opa-utils/objectsenvelopes"
+	"github.com/kubescape/opa-utils/objectsenvelopes/localworkload"
+	"github.com/kubescape/opa-utils/reporthandling"
+	"github.com/kubescape/opa-utils/reporthandling/results/v1/resourcesresults"
+	reporthandlingv2 "github.com/kubescape/opa-utils/reporthandling/v2"
+	"github.com/mikefarah/yq/v4/pkg/yqlib"
+	"gopkg.in/op/go-logging.v1"
+)
+
+const UserValuePrefix = "YOUR_"
+
+func NewFixHandler(fixInfo *metav1.FixInfo) (*FixHandler, error) {
+	jsonFile, err := os.Open(fixInfo.ReportFile)
+	if err != nil {
+		return nil, err
+	}
+	defer jsonFile.Close()
+	byteValue, _ := ioutil.ReadAll(jsonFile)
+
+	var reportObj reporthandlingv2.PostureReport
+	if err = json.Unmarshal(byteValue, &reportObj); err != nil {
+		return nil, err
+	}
+
+	if err = isSupportedScanningTarget(&reportObj); err != nil {
+		return nil, err
+	}
+
+	localPath := getLocalPath(&reportObj)
+	if _, err = os.Stat(localPath); err != nil {
+		return nil, err
+	}
+
+	backendLoggerLeveled := logging.AddModuleLevel(logging.NewLogBackend(logger.L().GetWriter(), "", 0))
+	backendLoggerLeveled.SetLevel(logging.ERROR, "")
+	yqlib.GetLogger().SetBackend(backendLoggerLeveled)
+
+	return &FixHandler{
+		fixInfo:       fixInfo,
+		reportObj:     &reportObj,
+		localBasePath: localPath,
+	}, nil
+}
+
+func isSupportedScanningTarget(report *reporthandlingv2.PostureReport) error {
+	if report.Metadata.ScanMetadata.ScanningTarget == reporthandlingv2.GitLocal || report.Metadata.ScanMetadata.ScanningTarget == reporthandlingv2.Directory {
+		return nil
+	}
+
+	return fmt.Errorf("unsupported scanning target. Only local git and directory scanning targets are supported")
+}
+
+func getLocalPath(report *reporthandlingv2.PostureReport) string {
+	if report.Metadata.ScanMetadata.ScanningTarget == reporthandlingv2.GitLocal {
+		return report.Metadata.ContextMetadata.RepoContextMetadata.LocalRootPath
+	}
+
+	if report.Metadata.ScanMetadata.ScanningTarget == reporthandlingv2.Directory {
+		return report.Metadata.ContextMetadata.DirectoryContextMetadata.BasePath
+	}
+
+	return ""
+}
+
+func (h *FixHandler) buildResourcesMap() map[string]*reporthandling.Resource {
+	resourceIdToRawResource := make(map[string]*reporthandling.Resource)
+	for i := range h.reportObj.Resources {
+		resourceIdToRawResource[h.reportObj.Resources[i].GetID()] = &h.reportObj.Resources[i]
+	}
+	for i := range h.reportObj.Results {
+		if h.reportObj.Results[i].RawResource == nil {
+			continue
+		}
+		resourceIdToRawResource[h.reportObj.Results[i].RawResource.GetID()] = h.reportObj.Results[i].RawResource
+	}
+
+	return resourceIdToRawResource
+}
+
+func (h *FixHandler) getPathFromRawResource(obj map[string]interface{}) string {
+	if localworkload.IsTypeLocalWorkload(obj) {
+		localwork := localworkload.NewLocalWorkload(obj)
+		return localwork.GetPath()
+	} else if objectsenvelopes.IsTypeRegoResponseVector(obj) {
+		regoResponseVectorObject := objectsenvelopes.NewRegoResponseVectorObject(obj)
+		relatedObjects := regoResponseVectorObject.GetRelatedObjects()
+		for _, relatedObject := range relatedObjects {
+			if localworkload.IsTypeLocalWorkload(relatedObject.GetObject()) {
+				return relatedObject.(*localworkload.LocalWorkload).GetPath()
+			}
+		}
+	}
+
+	return ""
+}
+
+func (h *FixHandler) PrepareResourcesToFix() []ResourceFixInfo {
+	resourceIdToResource := h.buildResourcesMap()
+
+	resourcesToFix := make([]ResourceFixInfo, 0)
+	for _, result := range h.reportObj.Results {
+		if !result.GetStatus(nil).IsFailed() {
+			continue
+		}
+
+		resourceID := result.ResourceID
+		resourceObj := resourceIdToResource[resourceID]
+		resourcePath := h.getPathFromRawResource(resourceObj.GetObject())
+		if resourcePath == "" {
+			continue
+		}
+
+		if resourceObj.Source == nil || resourceObj.Source.FileType != reporthandling.SourceTypeYaml {
+			continue
+		}
+
+		relativePath, documentIndex, err := h.getFilePathAndIndex(resourcePath)
+		if err != nil {
+			logger.L().Error("Skipping invalid resource path: " + resourcePath)
+			continue
+		}
+
+		absolutePath := path.Join(h.localBasePath, relativePath)
+		if _, err := os.Stat(absolutePath); err != nil {
+			logger.L().Error("Skipping missing file: " + absolutePath)
+			continue
+		}
+
+		rfi := ResourceFixInfo{
+			FilePath:        absolutePath,
+			Resource:        resourceObj,
+			YamlExpressions: make(map[string]*armotypes.FixPath, 0),
+		}
+
+		for i := range result.AssociatedControls {
+			if result.AssociatedControls[i].GetStatus(nil).IsFailed() {
+				rfi.addYamlExpressionsFromResourceAssociatedControl(documentIndex, &result.AssociatedControls[i], h.fixInfo.SkipUserValues)
+			}
+		}
+
+		if len(rfi.YamlExpressions) > 0 {
+			resourcesToFix = append(resourcesToFix, rfi)
+		}
+	}
+
+	return resourcesToFix
+}
+
+func (h *FixHandler) PrintExpectedChanges(resourcesToFix []ResourceFixInfo) {
+	var sb strings.Builder
+	sb.WriteString("The following changes will be applied:\n")
+
+	for _, resourceFixInfo := range resourcesToFix {
+		sb.WriteString(fmt.Sprintf("File: %s\n", resourceFixInfo.FilePath))
+		sb.WriteString(fmt.Sprintf("Resource: %s\n", resourceFixInfo.Resource.GetName()))
+		sb.WriteString(fmt.Sprintf("Kind: %s\n", resourceFixInfo.Resource.GetKind()))
+		sb.WriteString("Changes:\n")
+
+		i := 1
+		for _, fixPath := range resourceFixInfo.YamlExpressions {
+			sb.WriteString(fmt.Sprintf("\t%d) %s = %s\n", i, (*fixPath).Path, (*fixPath).Value))
+			i++
+		}
+		sb.WriteString("\n------\n")
+	}
+
+	logger.L().Info(sb.String())
+}
+
+func (h *FixHandler) ApplyChanges(resourcesToFix []ResourceFixInfo) (int, []error) {
+	updatedFiles := make(map[string]bool)
+	errors := make([]error, 0)
+	for _, resourceToFix := range resourcesToFix {
+		singleExpression := reduceYamlExpressions(&resourceToFix)
+		if err := h.applyFixToFile(resourceToFix.FilePath, singleExpression); err != nil {
+			errors = append(errors,
+				fmt.Errorf("failed to fix resource [Name: '%s', Kind: '%s'] in '%s': %w ",
+					resourceToFix.Resource.GetName(),
+					resourceToFix.Resource.GetKind(),
+					resourceToFix.FilePath,
+					err))
+		} else {
+			updatedFiles[resourceToFix.FilePath] = true
+		}
+	}
+	return len(updatedFiles), errors
+}
+
+func (h *FixHandler) getFilePathAndIndex(filePathWithIndex string) (filePath string, documentIndex int, err error) {
+	splittedPath := strings.Split(filePathWithIndex, ":")
+	if len(splittedPath) <= 1 {
+		return "", 0, fmt.Errorf("expected to find ':' in file path")
+	}
+
+	filePath = splittedPath[0]
+	if documentIndex, err := strconv.Atoi(splittedPath[1]); err != nil {
+		return "", 0, err
+	} else {
+		return filePath, documentIndex, nil
+	}
+}
+
+func (h *FixHandler) applyFixToFile(filePath, yamlExpression string) (cmdError error) {
+	var completedSuccessfully bool
+	writeInPlaceHandler := yqlib.NewWriteInPlaceHandler(filePath)
+	out, err := writeInPlaceHandler.CreateTempFile()
+	if err != nil {
+		return fmt.Errorf("unable to create a tmp file for in-place YAML update: %s", err)
+	}
+
+	defer func() {
+		if cmdError == nil {
+			cmdError = writeInPlaceHandler.FinishWriteInPlace(completedSuccessfully)
+		}
+	}()
+
+	encoder := yqlib.NewYamlEncoder(2, false, yqlib.ConfiguredYamlPreferences)
+
+	printer := yqlib.NewPrinter(encoder, yqlib.NewSinglePrinterWriter(out))
+	allAtOnceEvaluator := yqlib.NewAllAtOnceEvaluator()
+
+	preferences := yqlib.ConfiguredYamlPreferences
+	preferences.EvaluateTogether = true
+	decoder := yqlib.NewYamlDecoder(preferences)
+
+	err = allAtOnceEvaluator.EvaluateFiles(yamlExpression, []string{filePath}, printer, decoder)
+
+	completedSuccessfully = err == nil
+
+	return err
+}
+
+func (rfi *ResourceFixInfo) addYamlExpressionsFromResourceAssociatedControl(documentIndex int, ac *resourcesresults.ResourceAssociatedControl, skipUserValues bool) {
+	for _, rule := range ac.ResourceAssociatedRules {
+		if !rule.GetStatus(nil).IsFailed() {
+			continue
+		}
+
+		for _, rulePaths := range rule.Paths {
+			if rulePaths.FixPath.Path == "" {
+				continue
+			}
+			if strings.HasPrefix(rulePaths.FixPath.Value, UserValuePrefix) && skipUserValues {
+				continue
+			}
+
+			yamlExpression := fixPathToValidYamlExpression(rulePaths.FixPath.Path, rulePaths.FixPath.Value, documentIndex)
+			rfi.YamlExpressions[yamlExpression] = &rulePaths.FixPath
+		}
+	}
+}
+
+// reduceYamlExpressions reduces the number of yaml expressions to a single one
+func reduceYamlExpressions(resource *ResourceFixInfo) string {
+	expressions := make([]string, 0, len(resource.YamlExpressions))
+	for expr := range resource.YamlExpressions {
+		expressions = append(expressions, expr)
+	}
+
+	return strings.Join(expressions, " | ")
+}
+
+func fixPathToValidYamlExpression(fixPath, value string, documentIndexInYaml int) string {
+	isStringValue := true
+	if _, err := strconv.ParseBool(value); err == nil {
+		isStringValue = false
+	} else if _, err := strconv.ParseFloat(value, 64); err == nil {
+		isStringValue = false
+	} else if _, err := strconv.Atoi(value); err == nil {
+		isStringValue = false
+	}
+
+	// Strings should be quoted
+	if isStringValue {
+		value = fmt.Sprintf("\"%s\"", value)
+	}
+
+	// select document index and add a dot for the root node
+	return fmt.Sprintf("select(di==%d).%s |= %s", documentIndexInYaml, fixPath, value)
+}
diff --git a/core/pkg/fixhandler/fixhandler_test.go b/core/pkg/fixhandler/fixhandler_test.go
new file mode 100644
index 00000000..9073361c
--- /dev/null
+++ b/core/pkg/fixhandler/fixhandler_test.go
@@ -0,0 +1,117 @@
+package fixhandler
+
+import (
+	"io/ioutil"
+	"os"
+	"path/filepath"
+	"testing"
+
+	"github.com/stretchr/testify/assert"
+
+	logger "github.com/kubescape/go-logger"
+	metav1 "github.com/kubescape/kubescape/v2/core/meta/datastructures/v1"
+	reporthandlingv2 "github.com/kubescape/opa-utils/reporthandling/v2"
+	"github.com/mikefarah/yq/v4/pkg/yqlib"
+	"gopkg.in/op/go-logging.v1"
+)
+
+func NewFixHandlerMock() (*FixHandler, error) {
+	backendLoggerLeveled := logging.AddModuleLevel(logging.NewLogBackend(logger.L().GetWriter(), "", 0))
+	backendLoggerLeveled.SetLevel(logging.ERROR, "")
+	yqlib.GetLogger().SetBackend(backendLoggerLeveled)
+
+	return &FixHandler{
+		fixInfo:       &metav1.FixInfo{},
+		reportObj:     &reporthandlingv2.PostureReport{},
+		localBasePath: "",
+	}, nil
+}
+
+func onlineBoutiquePath() string {
+	o, _ := os.Getwd()
+	return filepath.Join(filepath.Dir(o), "..", "..", "examples", "online-boutique")
+}
+
+func TestFixHandler_applyFixToFile(t *testing.T) {
+	originalFilePath := filepath.Join(onlineBoutiquePath(), "adservice.yaml")
+	// create temp file
+	tempFile, err := ioutil.TempFile("", "adservice.yaml")
+	if err != nil {
+		panic(err)
+	}
+	defer os.Remove(tempFile.Name())
+
+	// read original file
+	b, err := ioutil.ReadFile(originalFilePath)
+	if err != nil {
+		panic(err)
+	}
+	assert.NotContains(t, string(b), "readOnlyRootFilesystem: true")
+
+	// write original file contents to temp file
+	err = ioutil.WriteFile(tempFile.Name(), b, 0644)
+	if err != nil {
+		panic(err)
+	}
+
+	// make changes to temp file
+	h, _ := NewFixHandlerMock()
+	yamlExpression := "select(di==0).spec.template.spec.containers[0].securityContext.readOnlyRootFilesystem |= true"
+	err = h.applyFixToFile(tempFile.Name(), yamlExpression)
+	assert.NoError(t, err)
+
+	// Check temp file contents
+	b, err = ioutil.ReadFile(tempFile.Name())
+	if err != nil {
+		panic(err)
+	}
+	assert.Contains(t, string(b), "readOnlyRootFilesystem: true")
+}
+
+func Test_fixPathToValidYamlExpression(t *testing.T) {
+	type args struct {
+		fixPath             string
+		value               string
+		documentIndexInYaml int
+	}
+	tests := []struct {
+		name string
+		args args
+		want string
+	}{
+		{
+			name: "fix path with boolean value",
+			args: args{
+				fixPath:             "spec.template.spec.containers[0].securityContext.privileged",
+				value:               "true",
+				documentIndexInYaml: 2,
+			},
+			want: "select(di==2).spec.template.spec.containers[0].securityContext.privileged |= true",
+		},
+		{
+			name: "fix path with string value",
+			args: args{
+				fixPath:             "metadata.namespace",
+				value:               "YOUR_NAMESPACE",
+				documentIndexInYaml: 0,
+			},
+			want: "select(di==0).metadata.namespace |= \"YOUR_NAMESPACE\"",
+		},
+		{
+			name: "fix path with number",
+			args: args{
+				fixPath:             "xxx.yyy",
+				value:               "123",
+				documentIndexInYaml: 0,
+			},
+			want: "select(di==0).xxx.yyy |= 123",
+		},
+	}
+	for _, tt := range tests {
+		t.Run(tt.name, func(t *testing.T) {
+			if got := fixPathToValidYamlExpression(tt.args.fixPath, tt.args.value, tt.args.documentIndexInYaml); got != tt.want {
+				t.Errorf("fixPathToValidYamlExpression() = %v, want %v", got, tt.want)
+			}
+		})
+	}
+}
diff --git a/core/pkg/resultshandling/printer/v2/utils.go b/core/pkg/resultshandling/printer/v2/utils.go
index b6ba3ac7..58e6cd51 100644
--- a/core/pkg/resultshandling/printer/v2/utils.go
+++ b/core/pkg/resultshandling/printer/v2/utils.go
@@ -14,6 +14,7 @@ import (
 func FinalizeResults(data *cautils.OPASessionObj) *reporthandlingv2.PostureReport {
 	report := reporthandlingv2.PostureReport{
 		SummaryDetails:       data.Report.SummaryDetails,
+		Metadata:             *data.Metadata,
 		ClusterAPIServerInfo: data.Report.ClusterAPIServerInfo,
 		ReportGenerationTime: data.Report.ReportGenerationTime,
 		Attributes:           data.Report.Attributes,