diff --git a/e2e/e2e.sh b/e2e/e2e.sh
index 4744719f..7b4a0a9b 100755
--- a/e2e/e2e.sh
+++ b/e2e/e2e.sh
@@ -26,7 +26,7 @@ kubectl -n istio-system wait --for=condition=complete job/istio-init-crd-10
 kubectl -n istio-system wait --for=condition=complete job/istio-init-crd-11
 
 echo 'Installing Istio control plane'
-helm upgrade -i istio istio.io/istio --wait --namespace istio-system -f ./istio-values.yaml
+helm upgrade -i istio istio.io/istio --wait --namespace istio-system -f ${REPO_ROOT}/e2e/istio-values.yaml
 
 export KUBECONFIG="$(kind get kubeconfig-path)"
 
@@ -46,7 +46,7 @@ kubectl -n test apply -f ${REPO_ROOT}/artifacts/loadtester/
 kubectl -n test rollout status deployment/flagger-loadtester
 
 echo '>>> Initialising canary'
-kubectl apply -f ./workload.yaml
+kubectl apply -f ${REPO_ROOT}/e2e/workload.yaml
 
 cat <<EOF | kubectl apply -f -
 apiVersion: flagger.app/v1alpha3